Draft genome of Pseudomonas sp. RGM 2987 isolated from Stevia philippiana roots reveals its potential as a plant biostimulant and potentially constitutes a novel species
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Keywords

Biostimulant
Chilean Altiplano
Draft genome
Plant growth-promoting bacteria
Pseudomonas
Pseudomonas novel species
Rhizobacteria
Rhizosphere
Roots
Stevia philippiana

How to Cite

1.
Guerra M, Carrasco-Fernández J, Valdés JH, Panichini M, Castro JF. Draft genome of Pseudomonas sp. RGM 2987 isolated from Stevia philippiana roots reveals its potential as a plant biostimulant and potentially constitutes a novel species. Electron. J. Biotechnol. [Internet]. 2023 Jan. 15 [cited 2024 Sep. 19];61. Available from: https://preprints.pucv.cl/index.php/ejbiotechnology/article/view/2022.10.001

Abstract

Background: Reports on Pseudomonas species associated with Chilean native plants and their diversity are scarce. The draft genome of Pseudomonas sp. RGM 2987 isolated from the rhizosphere of Stevia philippiana, a native Chilean plant from the Altiplano, is presented.

Results: The assembled genome features 6,161,133 bp, a G+C content of 61.3%, and 5,350 predicted open reading frames. dDDH, and ANIb differences between RGM 2987 and the closest relatives support its classification as a new species within the Pseudomonas genus. Genome mining and functional classification revealed the presence of genes involved in cell function and metabolism as well as plant-growth promotion, including those for indole acetic acid production, phosphate solubilization, and ethylene concentration.

Conclusions: The draft genome of Pseudomonas sp. RGM 2987 provides insights on its phylogeny and classification as a new species and shed light on its potential as a plant-biostimulant, expanding our knowledge on Pseudomonas biodiversity worldwide and, specifically, for those strains associated with native Chilean plants.

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